In recent decades, the importance of supply chain management has increased due to the frequency and severity of disruptions. The issue of supply chain resilience is widely discussed in the scientific literature. It should be noted that most studies focus on the functioning of commercial supply chains. Given the lack of a systematic approach to the specific threats and measures to ensure the resilience of military supply chains within the context of the Lithuanian Armed Forces (LAF), the objective of this article is to present the main findings of the research conducted to identify threats that are crucial for the supply chains important to the LAF and to outline measures that are taken to cope with the identified external threats.